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LOC107920325 probable galacturonosyltransferase 12 [ Gossypium hirsutum (cotton) ]

Gene ID: 107920325, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107920325
Gene description
probable galacturonosyltransferase 12
Locus tag
ERO13_D13G146200v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107920325 in Genome Data Viewer
Location:
chromosome: D13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D13 NC_053449.1 (51000419..51003735)

Chromosome D13 - NC_053449.1Genomic Context describing neighboring genes Neighboring gene polycomb group protein FIE1 Neighboring gene uncharacterized LOC107919747 Neighboring gene transcription factor ILR3 Neighboring gene photosynthetic NDH subunit of lumenal location 3, chloroplastic Neighboring gene 21.7 kDa class VI heat shock protein Neighboring gene formin-like protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053449.1 Chromosome D13 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053449.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    51000419..51003735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016849982.2 → XP_016705471.1  probable galacturonosyltransferase 12

    UniProtKB/TrEMBL
    A0A1U8ICM0, A0A1U8KSN2
    Conserved Domains (1) summary
    PLN02659
    Location:1 → 532
    PLN02659; Probable galacturonosyltransferase
Nucleotide Protein
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