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LOC107913530 endoglucanase 24 [ Gossypium hirsutum (cotton) ]

Gene ID: 107913530, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107913530
Gene description
endoglucanase 24
Locus tag
ERO13_A13G030600v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107913530 in Genome Data Viewer
Location:
chromosome: A13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A13 NC_053436.1 (3534358..3539295, complement)

Chromosome A13 - NC_053436.1Genomic Context describing neighboring genes Neighboring gene B-box zinc finger protein 19 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene fructose-bisphosphate aldolase 1, chloroplastic Neighboring gene protein FMP32, mitochondrial Neighboring gene cytochrome P450 84A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053436.1 Chromosome A13 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoglucanase 24

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053436.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    3534358..3539295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016842143.2 → XP_016697632.1  endoglucanase 24

    UniProtKB/TrEMBL
    A0A1U8K583
    Conserved Domains (1) summary
    cl02959
    Location:20 → 503
    Glyco_hydro_9; Glycosyl hydrolase family 9
Nucleotide Protein
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