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LOC107913467 laccase-17 [ Gossypium hirsutum (cotton) ]

Gene ID: 107913467, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107913467
Gene description
laccase-17
Locus tag
ERO13_A13G023700v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107913467 in Genome Data Viewer
Location:
chromosome: A13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A13 NC_053436.1 (2758214..2760830)

Chromosome A13 - NC_053436.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121212165 Neighboring gene cytochrome P450 CYP736A12 Neighboring gene uncharacterized LOC121212166 Neighboring gene cytochrome P450 CYP736A12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053436.1 Chromosome A13 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053436.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    2758214..2760830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016842061.2 → XP_016697550.2  laccase-17

    UniProtKB/TrEMBL
    A0A1U8K4W1
    Conserved Domains (1) summary
    TIGR03389
    Location:29 → 576
    laccase; plant
Nucleotide Protein
Heading Accession and Version

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