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LOC107912360 pectinesterase [ Gossypium hirsutum (cotton) ]

Gene ID: 107912360, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107912360
Gene description
pectinesterase
Locus tag
ERO13_D11G118500v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107912360 in Genome Data Viewer
Location:
chromosome: D11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D11 NC_053447.1 (11141323..11144647, complement)

Chromosome D11 - NC_053447.1Genomic Context describing neighboring genes Neighboring gene protein PFC0760c Neighboring gene endoglucanase 17-like Neighboring gene probable pectinesterase/pectinesterase inhibitor 7 Neighboring gene RING-H2 finger protein ATL5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053447.1 Chromosome D11 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053447.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    11141323..11144647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016840494.2 → XP_016695983.2  pectinesterase

    UniProtKB/TrEMBL
    A0A1U8K4T7
    Conserved Domains (1) summary
    PLN02933
    Location:77 → 559
    PLN02933; Probable pectinesterase/pectinesterase inhibitor
Nucleotide Protein
Heading Accession and Version

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