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LOC107909293 callose synthase 12 [ Gossypium hirsutum (cotton) ]

Gene ID: 107909293, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107909293
Gene description
callose synthase 12
Locus tag
ERO13_D02G179801v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107909293 in Genome Data Viewer
Location:
chromosome: D02
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D02 NC_053438.1 (65418188..65425833, complement)

Chromosome D02 - NC_053438.1Genomic Context describing neighboring genes Neighboring gene putative ubiquitin-conjugating enzyme E2 38 Neighboring gene two pore calcium channel protein 1-like Neighboring gene renalase Neighboring gene small nucleolar RNA J33 Neighboring gene putative uncharacterized protein DDB_G0290521 Neighboring gene uncharacterized LOC107909295

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053438.1 Chromosome D02 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053438.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    65418188..65425833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016836769.2 → XP_016692258.2  callose synthase 12

    UniProtKB/TrEMBL
    A0A1U8JU15
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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