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LOC107909288 mannan endo-1,4-beta-mannosidase 2 [ Gossypium hirsutum (cotton) ]

Gene ID: 107909288, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107909288
Gene description
mannan endo-1,4-beta-mannosidase 2
Locus tag
ERO13_D02G179300v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107909288 in Genome Data Viewer
Location:
chromosome: D02
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D02 NC_053438.1 (65363291..65367654)

Chromosome D02 - NC_053438.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107909285 Neighboring gene uncharacterized LOC107909286 Neighboring gene uncharacterized LOC107909289 Neighboring gene putative ubiquitin-conjugating enzyme E2 38

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053438.1 Chromosome D02 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan endo-1,4-beta-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannan endo-1,4-beta-mannosidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053438.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    65363291..65367654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016836761.2 → XP_016692250.1  mannan endo-1,4-beta-mannosidase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U8HJU7, A0A1U8JPS6
    Conserved Domains (1) summary
    COG3934
    Location:69 → 421
    COG3934; Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism]

  2. XM_016836762.2 → XP_016692251.1  mannan endo-1,4-beta-mannosidase 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U8HJU8, A0A1U8JPP0
    Conserved Domains (1) summary
    COG3934
    Location:63 → 415
    COG3934; Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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