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LOC107908686 beta-fructofuranosidase, insoluble isoenzyme 1 [ Gossypium hirsutum (cotton) ]

Gene ID: 107908686, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107908686
Gene description
beta-fructofuranosidase, insoluble isoenzyme 1
Locus tag
ERO13_D09G134100v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107908686 in Genome Data Viewer
Location:
chromosome: D09
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D09 NC_053445.1 (43670172..43675993, complement)

Chromosome D09 - NC_053445.1Genomic Context describing neighboring genes Neighboring gene agamous-like MADS-box protein AGL90 Neighboring gene uncharacterized LOC107929721 Neighboring gene beta-fructofuranosidase, insoluble isoenzyme 1-like Neighboring gene kinesin-like protein KIN-5C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053445.1 Chromosome D09 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-fructofuranosidase, insoluble isoenzyme 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053445.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    43670172..43675993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016835923.2 → XP_016691412.1  beta-fructofuranosidase, insoluble isoenzyme 1 isoform X2

    UniProtKB/TrEMBL
    A0A1U8JMA2
    Conserved Domains (1) summary
    smart00640
    Location:51 → 514
    Glyco_32; Glycosyl hydrolases family 32

  2. XM_016835922.2 → XP_016691411.1  beta-fructofuranosidase, insoluble isoenzyme 1 isoform X1

    UniProtKB/TrEMBL
    A0A1U8JMB6
    Conserved Domains (1) summary
    smart00640
    Location:51 → 527
    Glyco_32; Glycosyl hydrolases family 32

  3. XM_041100796.1 → XP_040956730.1  beta-fructofuranosidase, insoluble isoenzyme 1 isoform X3

    Conserved Domains (1) summary
    smart00640
    Location:51 → 484
    Glyco_32; Glycosyl hydrolases family 32
Nucleotide Protein
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