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LOC107905804 mitochondrial arginine transporter BAC1 [ Gossypium hirsutum (cotton) ]

Gene ID: 107905804, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107905804
Gene description
mitochondrial arginine transporter BAC1
Locus tag
ERO13_D05G162400v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107905804 in Genome Data Viewer
Location:
chromosome: D05
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D05 NC_053441.1 (14421592..14425050, complement)

Chromosome D05 - NC_053441.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107905807 Neighboring gene uncharacterized protein At4g28440 Neighboring gene MACPF domain-containing protein NSL1 Neighboring gene auxin-repressed 12.5 kDa protein Neighboring gene protein FRIGIDA-ESSENTIAL 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053441.1 Chromosome D05 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053441.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    14421592..14425050 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016832567.2 → XP_016688056.1  mitochondrial arginine transporter BAC1

    UniProtKB/TrEMBL
    A0A1U8JCL4, A0A1U8KBT8
    Conserved Domains (1) summary
    pfam00153
    Location:8 → 101
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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