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LOC107904388 beta-glucosidase BoGH3B [ Gossypium hirsutum (cotton) ]

Gene ID: 107904388, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107904388
Gene description
beta-glucosidase BoGH3B
Locus tag
ERO13_D05G286800v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107904388 in Genome Data Viewer
Location:
chromosome: D05
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D05 NC_053441.1 (29822006..29826746)

Chromosome D05 - NC_053441.1Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 Neighboring gene uncharacterized LOC107904389 Neighboring gene inactive protein RESTRICTED TEV MOVEMENT 2 Neighboring gene sucrose-phosphatase 2 Neighboring gene ABC transporter I family member 6, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053441.1 Chromosome D05 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-glucosidase BoGH3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053441.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    29822006..29826746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016830744.2 → XP_016686233.2  beta-glucosidase BoGH3B

    UniProtKB/TrEMBL
    A0A1U8JC14
    Conserved Domains (2) summary
    COG1472
    Location:44 → 452
    BglX; Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]
    pfam01915
    Location:409 → 617
    Glyco_hydro_3_C; Glycosyl hydrolase family 3 C-terminal domain
Nucleotide Protein
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