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LOC107903431 beta-1,2-xylosyltransferase [ Gossypium hirsutum (cotton) ]

Gene ID: 107903431, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107903431
Gene description
beta-1,2-xylosyltransferase
Locus tag
ERO13_D05G377800v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107903431 in Genome Data Viewer
Location:
chromosome: D05
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D05 NC_053441.1 (65002645..65005617)

Chromosome D05 - NC_053441.1Genomic Context describing neighboring genes Neighboring gene glycerophosphodiester phosphodiesterase GDPDL3 Neighboring gene pirin-like protein Neighboring gene uncharacterized LOC107902897 Neighboring gene 40S ribosomal protein S8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053441.1 Chromosome D05 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,2-xylosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053441.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    65002645..65005617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016829479.2 → XP_016684968.1  beta-1,2-xylosyltransferase

    UniProtKB/TrEMBL
    A0A1U8J8K6, A0A1U8M0H8
    Conserved Domains (1) summary
    pfam04577
    Location:243 → 493
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

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