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LOC107893685 UDP-arabinopyranose mutase 1 [ Gossypium hirsutum (cotton) ]

Gene ID: 107893685, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107893685
Gene description
UDP-arabinopyranose mutase 1
Locus tag
ERO13_A13G084200v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107893685 in Genome Data Viewer
Location:
chromosome: A13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A13 NC_053436.1 (29582860..29584508, complement)

Chromosome A13 - NC_053436.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107893684 Neighboring gene small nucleolar RNA R71 Neighboring gene cytochrome P450 85A1 Neighboring gene cytochrome P450 85A Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053436.1 Chromosome A13 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053436.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    29582860..29584508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016818744.2 → XP_016674233.1  UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A1U8ID50, A0A1U8KSL9
    Conserved Domains (1) summary
    PLN03180
    Location:5 → 349
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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