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LOC107879808 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [ Capsicum annuum ]

Gene ID: 107879808, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107879808
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107879808 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 8 NC_061118.1 (153176494..153178841)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 8 NC_029984.1 (131088697..131091009)

Chromosome 8 - NC_061118.1Genomic Context describing neighboring genes Neighboring gene cyclin-U4-1 Neighboring gene probable pectinesterase/pectinesterase inhibitor 25 Neighboring gene putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 Neighboring gene putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061118.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    153176494..153178841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016726752.2 → XP_016582238.2  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases