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LOC107871225 hydroxyproline O-galactosyltransferase GALT3 [ Capsicum annuum ]

Gene ID: 107871225, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107871225
Gene description
hydroxyproline O-galactosyltransferase GALT3
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107871225 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 5 NC_061115.1 (212257387..212268105, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 5 NC_029981.1 (204743201..204753759, complement)

Chromosome 5 - NC_061115.1Genomic Context describing neighboring genes Neighboring gene leghemoglobin reductase Neighboring gene probable protein phosphatase 2C 49 Neighboring gene kirola-like Neighboring gene uncharacterized LOC107871226

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase GALT3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061115.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    212257387..212268105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047412702.1 → XP_047268658.1  hydroxyproline O-galactosyltransferase GALT3

  2. XM_047412703.1 → XP_047268659.1  hydroxyproline O-galactosyltransferase GALT3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases