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LOC107870013 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [ Capsicum annuum ]

Gene ID: 107870013, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107870013
Gene description
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107870013 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 5 NC_061115.1 (510391..516655, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 5 NC_029981.1 (644188..650354, complement)

Chromosome 5 - NC_061115.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107870011 Neighboring gene U4/U6 small nuclear ribonucleoprotein PRP4-like protein Neighboring gene DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic Neighboring gene mitochondrial acidic protein MAM33

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061115.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    510391..516655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016716394.2 → XP_016571880.2  UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases