U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107869454 cellulose synthase-like protein D3 [ Capsicum annuum ]

Gene ID: 107869454, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107869454
Gene description
cellulose synthase-like protein D3
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107869454 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 1 NC_061111.1 (20758396..20764525)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 1 NC_029977.1 (18478387..18484442)

Chromosome 1 - NC_061111.1Genomic Context describing neighboring genes Neighboring gene UPF0481 protein At3g47200 Neighboring gene UPF0481 protein At3g47200-like Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 30 Neighboring gene uncharacterized LOC124886480

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cellulose synthase-like protein D3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061111.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    20758396..20764525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016716000.2 → XP_016571486.2  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A2G3AFQ2

  2. XM_047395053.1 → XP_047251009.1  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A2G3AFQ2

  3. XM_047395047.1 → XP_047251003.1  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A2G3AFQ2

  4. XM_016715992.2 → XP_016571478.2  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A2G3AFQ2

  5. XM_016716004.2 → XP_016571490.2  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A2G3AFQ2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases