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LOC107867841 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 [ Capsicum annuum ]

Gene ID: 107867841, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107867841
Gene description
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107867841 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 4 NC_061114.1 (223317207..223322495, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 4 NC_029980.1 (74731774..74737038, complement)

Chromosome 4 - NC_061114.1Genomic Context describing neighboring genes Neighboring gene protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 Neighboring gene UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene protein TIC 22, chloroplastic Neighboring gene anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061114.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    223317207..223322495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016714289.2 → XP_016569775.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U8GF82
    Conserved Domains (1) summary
    cd02537
    Location:289 → 533
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_016714290.2 → XP_016569776.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U8GEM0
    Conserved Domains (1) summary
    cd02537
    Location:226 → 470
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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