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LOC107866743 galactan beta-1,4-galactosyltransferase GALS1 [ Capsicum annuum ]

Gene ID: 107866743, updated on 10-Mar-2023

Summary

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Gene symbol
LOC107866743
Gene description
galactan beta-1,4-galactosyltransferase GALS1
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107866743 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 4 NC_061114.1 (231187388..231189841)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 4 NC_029980.1 (375431..377701, complement)

Chromosome 4 - NC_061114.1Genomic Context describing neighboring genes Neighboring gene chlorophyll a-b binding protein 7, chloroplastic Neighboring gene uncharacterized LOC107866745 Neighboring gene protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 Neighboring gene uncharacterized LOC107866742

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
galactan beta-1,4-galactosyltransferase GALS1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061114.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    231187388..231189841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016712699.2 → XP_016568185.1  galactan beta-1,4-galactosyltransferase GALS1

    UniProtKB/TrEMBL
    A0A1U8GAN5
    Conserved Domains (1) summary
    pfam01697
    Location:203 → 411
    Glyco_transf_92; Glycosyltransferase family 92
Nucleotide Protein
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