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LOC107862761 UDP-arabinopyranose mutase 3 [ Capsicum annuum ]

Gene ID: 107862761, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107862761
Gene description
UDP-arabinopyranose mutase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 3 NC_061113.1 (241120610..241122281)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 3 NC_029979.1 (27343214..27344846)

Chromosome 3 - NC_061113.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA Neighboring gene ABC transporter G family member 11 Neighboring gene uncharacterized LOC107864928 Neighboring gene SUMO-activating enzyme subunit 1B-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061113.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    241120610..241122281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016708420.2 → XP_016563906.1  UDP-arabinopyranose mutase 3 isoform X2

    UniProtKB/TrEMBL
    A0A2G3A0X1
    Conserved Domains (1) summary
    PLN03180
    Location:1 → 342
    PLN03180; reversibly glycosylated polypeptide; Provisional

  2. XM_016708419.2 → XP_016563905.1  UDP-arabinopyranose mutase 3 isoform X1

    UniProtKB/TrEMBL
    A0A2G3A0X1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases