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LOC107860690 uncharacterized LOC107860690 [ Capsicum annuum ]

Gene ID: 107860690, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107860690
Gene description
uncharacterized LOC107860690
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 2 NC_061112.1 (152687197..152690647, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 2 NC_029978.1 (162242214..162245391, complement)

Chromosome 2 - NC_061112.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene SUPPRESSOR OF GAMMA RESPONSE 1 Neighboring gene glucuronokinase 1 Neighboring gene uncharacterized LOC107860692

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC107860690

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061112.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    152687197..152690647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016706140.2 → XP_016561626.1  uncharacterized protein LOC107860690 isoform X1

    UniProtKB/TrEMBL
    A0A1U8FQY2
    Conserved Domains (1) summary
    pfam04724
    Location:39 → 386
    Glyco_transf_17; Glycosyltransferase family 17

  2. XM_047407618.1 → XP_047263574.1  uncharacterized protein LOC107860690 isoform X2

RNA

  1. XR_001671578.2 RNA Sequence

  2. XR_001671577.2 RNA Sequence

Nucleotide Protein
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Molecular Biology Databases