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LOC107859190 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [ Capsicum annuum ]

Gene ID: 107859190, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107859190
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 2 NC_061112.1 (123679090..123684516, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 2 NC_029978.1 (129850327..129855814)

Chromosome 2 - NC_061112.1Genomic Context describing neighboring genes Neighboring gene protein transport protein Sec61 subunit alpha Neighboring gene protein GRAVITROPIC IN THE LIGHT 1 Neighboring gene precursor of CEP14 Neighboring gene uncharacterized LOC107859189

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061112.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    123679090..123684516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016704108.2 → XP_016559594.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

    UniProtKB/TrEMBL
    A0A2G3A7U6
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 844
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Nucleotide Protein
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