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LOC107856325 probable beta-1,3-galactosyltransferase 2 [ Capsicum annuum ]

Gene ID: 107856325, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107856325
Gene description
probable beta-1,3-galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107856325 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 7 NC_061117.1 (223419819..223424697, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) Unplaced Scaffold NW_015961630.1 (832449..837247)

Chromosome 7 - NC_061117.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107856302 Neighboring gene autophagy-related protein 8C-like Neighboring gene heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic Neighboring gene uncharacterized LOC107856322

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061117.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    223419819..223424697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016701318.2 → XP_016556804.1  probable beta-1,3-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A1U8FM18
    Conserved Domains (1) summary
    PLN03193
    Location:5 → 409
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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