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LOC107847778 probable UDP-arabinopyranose mutase 1 [ Capsicum annuum ]

Gene ID: 107847778, updated on 30-Nov-2023

Summary

Gene symbol
LOC107847778
Gene description
probable UDP-arabinopyranose mutase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

See LOC107847778 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 11 NC_061121.1 (12558210..12562374, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 11 NC_029987.1 (204977154..204981279)

Chromosome 11 - NC_061121.1Genomic Context describing neighboring genes Neighboring gene protein CRABS CLAW Neighboring gene uncharacterized LOC107848260 Neighboring gene cytochrome b5 Neighboring gene folate synthesis bifunctional protein, mitochondrial

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
probable UDP-arabinopyranose mutase 1
Names
alpha-1,4-glucan-protein synthase [UDP-forming] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061121.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    12558210..12562374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016692261.2XP_016547747.1  probable UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A1U8EKL9
    Conserved Domains (1) summary
    PLN03180
    Location:2346
    PLN03180; reversibly glycosylated polypeptide; Provisional