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LOC107846342 digalactosyldiacylglycerol synthase 1, chloroplastic [ Capsicum annuum ]

Gene ID: 107846342, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107846342
Gene description
digalactosyldiacylglycerol synthase 1, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107846342 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 8 NC_061118.1 (38422167..38430136, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 1 NC_029977.1 (231620953..231628992, complement)

Chromosome 8 - NC_061118.1Genomic Context describing neighboring genes Neighboring gene aluminum-activated malate transporter 8-like Neighboring gene secreted RxLR effector protein 161-like Neighboring gene protein LEAD-SENSITIVE 1 Neighboring gene serine/threonine-protein kinase rio2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables digalactosyldiacylglycerol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
digalactosyldiacylglycerol synthase 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061118.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    38422167..38430136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016690757.2 → XP_016546243.1  digalactosyldiacylglycerol synthase 1, chloroplastic isoform X1

    UniProtKB/TrEMBL
    A0A1U8EGB0

  2. XM_016690760.2 → XP_016546246.1  digalactosyldiacylglycerol synthase 1, chloroplastic isoform X2

    UniProtKB/TrEMBL
    A0A1U8EIN3
    Conserved Domains (1) summary
    PLN02501
    Location:22 → 753
    PLN02501; digalactosyldiacylglycerol synthase

  3. XM_016690763.2 → XP_016546249.1  digalactosyldiacylglycerol synthase 1, chloroplastic isoform X3

    UniProtKB/TrEMBL
    A0A1U8EQU0
Nucleotide Protein
Heading Accession and Version

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