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LOC107845385 probable galacturonosyltransferase 12 [ Capsicum annuum ]

Gene ID: 107845385, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107845385
Gene description
probable galacturonosyltransferase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107845385 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 10 NC_061120.1 (1375306..1379061)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 10 NC_029986.1 (351718..356500)

Chromosome 10 - NC_061120.1Genomic Context describing neighboring genes Neighboring gene polyubiquitin Neighboring gene trafficking protein particle complex subunit 3 Neighboring gene uncharacterized LOC124888088 Neighboring gene transcription factor ILR3 Neighboring gene uncharacterized LOC107845285

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061120.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    1375306..1379061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016689675.2 → XP_016545161.1  probable galacturonosyltransferase 12

    UniProtKB/TrEMBL
    A0A1U8EFJ7
    Conserved Domains (1) summary
    cl28622
    Location:5 → 537
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases