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LOC107840823 probable galacturonosyltransferase 6 [ Capsicum annuum ]

Gene ID: 107840823, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107840823
Gene description
probable galacturonosyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107840823 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 9 NC_061119.1 (217997749..218004620, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 9 NC_029985.1 (1548557..1556907, complement)

Chromosome 9 - NC_061119.1Genomic Context describing neighboring genes Neighboring gene sarcolemmal membrane-associated protein Neighboring gene uncharacterized LOC107841062 Neighboring gene anthranilate synthase beta subunit 2, chloroplastic Neighboring gene uncharacterized LOC124887262 Neighboring gene bHLH transcription factor RHL1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061119.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    217997749..218004620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047396649.1 → XP_047252605.1  probable galacturonosyltransferase 6 isoform X2

  2. XM_047396648.1 → XP_047252604.1  probable galacturonosyltransferase 6 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases