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LOC107839276 cellulose synthase A catalytic subunit 3 [UDP-forming] [ Capsicum annuum ]

Gene ID: 107839276, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107839276
Gene description
cellulose synthase A catalytic subunit 3 [UDP-forming]
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107839276 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 1 NC_061111.1 (146498927..146507888, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 1 NC_029977.1 (168899144..168908132)

Chromosome 1 - NC_061111.1Genomic Context describing neighboring genes Neighboring gene chaperonin-like RbcX protein 2, chloroplastic Neighboring gene putative late blight resistance protein homolog R1B-23 Neighboring gene aspartyl protease family protein 2 Neighboring gene mediator of RNA polymerase II transcription subunit 27 Neighboring gene general transcription factor IIH subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 3 [UDP-forming]
Names
probable cellulose synthase A catalytic subunit 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061111.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    146498927..146507888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016682697.2 → XP_016538183.1  cellulose synthase A catalytic subunit 3 [UDP-forming]

    UniProtKB/TrEMBL
    A0A1U8DT48
    Conserved Domains (1) summary
    PLN02638
    Location:1 → 1083
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit
Nucleotide Protein
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