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LOC107838770 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [ Capsicum annuum ]

Gene ID: 107838770, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107838770
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107838770 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 8 NC_061118.1 (1644612..1650436)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 8 NC_029984.1 (1799416..1805215, complement)

Chromosome 8 - NC_061118.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107838771 Neighboring gene zinc finger protein 6-like Neighboring gene zinc finger protein 3-like Neighboring gene MACPF domain-containing protein At1g14780 Neighboring gene loganic acid O-methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061118.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    1644612..1650436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016681963.2 → XP_016537449.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

  2. XM_016681965.2 → XP_016537451.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6

Nucleotide Protein
Heading Accession and Version

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