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LOC107819363 sucrose-phosphatase 2 [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107819363, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107819363
Gene description
sucrose-phosphatase 2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
SPP2; NtSPP2
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Genomic context

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See LOC107819363 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015822001.1 (10034..17490, complement)

NW_015822001.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107819364 Neighboring gene uncharacterized serine-rich protein C1E8.05-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015822001.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Decreased sucrose-6-phosphate phosphatase level in transgenic tobacco inhibits photosynthesis, alters carbohydrate partitioning, and reduces growth. Chen S, et al. Planta, 2005 Jun. PMID 15657716

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sucrose-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose-phosphatase 2; sucrose-phosphate phosphatase 2
Names
sucrose-6-phosphate phosphatase
XP_016500957.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001326042.1 → NP_001312971.1  sucrose-phosphate phosphatase 2

    Status: PROVISIONAL

    Source sequence(s)
    AY729656
    UniProtKB/Swiss-Prot
    Q5IH13
    Conserved Domains (3) summary
    PLN02382
    Location:1 → 414
    PLN02382; probable sucrose-phosphatase
    pfam08472
    Location:262 → 394
    S6PP_C; Sucrose-6-phosphate phosphohydrolase C-terminal
    cl21460
    Location:158 → 220
    HAD_like; Haloacid Dehalogenase-like Hydrolases

RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015822001.1 Reference Ntab-TN90 Primary Assembly

    Range
    10034..17490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016645471.1 → XP_016500957.1  sucrose-phosphatase 2

    UniProtKB/TrEMBL
    A0A1S4CIC4
    Conserved Domains (3) summary
    PLN02382
    Location:1 → 414
    PLN02382; probable sucrose-phosphatase
    pfam08472
    Location:262 → 394
    S6PP_C; Sucrose-6-phosphate phosphohydrolase C-terminal
    cl21460
    Location:158 → 220
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5IH13.1 GenPept UniProtKB/Swiss-Prot:Q5IH13

Gene LinkOut

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