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LOC107815853 isocitrate dehydrogenase [NADP] [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107815853, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107815853
Gene description
isocitrate dehydrogenase [NADP]
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
IDH; IDP
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Genomic context

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See LOC107815853 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015812078.1 (185861..190390)

NW_015812078.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107815851 Neighboring gene uncharacterized LOC107815852 Neighboring gene uncharacterized LOC107815846

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015812078.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a tobacco cDNA encoding a cytosolic NADP-isocitrate dehydrogenase. Gálvez S, et al. Plant Mol Biol, 1996 Jan. PMID 8616254

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP]
Names
NADP(+)-specific ICDH
Oxalosuccinate decarboxylase
isocitrate dehydrogenase (NADP+)
XP_016496984.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001325963.1 → NP_001312892.1  isocitrate dehydrogenase [NADP]

    Status: PROVISIONAL

    Source sequence(s)
    X77944
    UniProtKB/Swiss-Prot
    P50218
    Conserved Domains (1) summary
    PLN00103
    Location:1 → 410
    PLN00103; isocitrate dehydrogenase (NADP+); Provisional

RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015812078.1 Reference Ntab-TN90 Primary Assembly

    Range
    185861..190390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016641498.1 → XP_016496984.1  isocitrate dehydrogenase [NADP]

    Conserved Domains (1) summary
    PLN00103
    Location:1 → 410
    PLN00103; isocitrate dehydrogenase (NADP+); Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P50218.1 GenPept UniProtKB/Swiss-Prot:P50218

Gene LinkOut

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Molecular Biology Databases