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LOC107813660 conserved oligomeric Golgi complex subunit 5-like [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107813660, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107813660
Gene description
conserved oligomeric Golgi complex subunit 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC107813660 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015806601.1 (32479..40429)

NW_015806601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107813659 Neighboring gene uncharacterized LOC107813653 Neighboring gene GDSL esterase/lipase At4g10955-like Neighboring gene transfer RNA arginine (anticodon ACG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015806601.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015806601.1 Reference Ntab-TN90 Primary Assembly

    Range
    32479..40429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016638943.1 → XP_016494429.1  conserved oligomeric Golgi complex subunit 5-like

    UniProtKB/TrEMBL
    A0A1S4C048
    Conserved Domains (1) summary
    pfam10392
    Location:87 → 185
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

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