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LOC107806628 cellulose synthase A catalytic subunit 7 [UDP-forming]-like [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107806628, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107806628
Gene description
cellulose synthase A catalytic subunit 7 [UDP-forming]-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
cesA
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Genomic context

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See LOC107806628 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015942981.1 (29250..35111)

NW_015942981.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107806626 Neighboring gene translation initiation factor IF-3-like Neighboring gene pentatricopeptide repeat-containing protein At4g30700-like Neighboring gene uncharacterized LOC107806627

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015942981.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 7 [UDP-forming]-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015942981.1 Reference Ntab-TN90 Primary Assembly

    Range
    29250..35111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016630818.1 → XP_016486304.1  cellulose synthase A catalytic subunit 7 [UDP-forming]-like isoform X1

    UniProtKB/TrEMBL
    A0A1S4BBN3
    Conserved Domains (1) summary
    PLN02189
    Location:1 → 1079
    PLN02189; cellulose synthase

  2. XM_016630819.1 → XP_016486305.1  cellulose synthase A catalytic subunit 7 [UDP-forming]-like isoform X2

    UniProtKB/TrEMBL
    A0A1S4BBJ9
    Conserved Domains (3) summary
    PLN02189
    Location:1 → 1041
    PLN02189; cellulose synthase
    pfam14569
    Location:30 → 95
    zf-UDP; Zinc-binding RING-finger
    cl11394
    Location:502 → 791
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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