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LOC107804421 probable LRR receptor-like serine/threonine-protein kinase At3g47570 [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107804421, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107804421
Gene description
probable LRR receptor-like serine/threonine-protein kinase At3g47570
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC107804421 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015939119.1 (28668..34594, complement)

NW_015939119.1Genomic Context describing neighboring genes Neighboring gene nucleobase-ascorbate transporter 2-like Neighboring gene uncharacterized protein At1g04910-like Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015939119.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor serine/threonine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable LRR receptor-like serine/threonine-protein kinase At3g47570

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015939119.1 Reference Ntab-TN90 Primary Assembly

    Range
    28668..34594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016628315.1 → XP_016483801.1  probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X3

    UniProtKB/TrEMBL
    A0A1S4B4M7

  2. XM_016628312.1 → XP_016483798.1  probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1

    UniProtKB/TrEMBL
    A0A1S4B4U0

  3. XM_016628314.1 → XP_016483800.1  probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2

    UniProtKB/TrEMBL
    A0A1S4B4E2

  4. XM_016628313.1 → XP_016483799.1  probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2

    UniProtKB/TrEMBL
    A0A1S4B4E2
Nucleotide Protein
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Gene LinkOut

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