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LOC107804379 bifunctional nitrilase/nitrile hydratase NIT4A [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107804379, updated on 25-Apr-2024

Summary

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Gene symbol
LOC107804379
Gene description
bifunctional nitrilase/nitrile hydratase NIT4A
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
NIT4A; TNIT4; TNIT4A; nitrilase
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Genomic context

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See LOC107804379 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015939057.1 (69194..75416)

NW_015939057.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107804378 Neighboring gene NAC domain-containing protein 60-like Neighboring gene methyl-CpG-binding domain-containing protein 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015939057.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nitrilase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nitrile hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detoxification of nitrogen compound IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional nitrilase/nitrile hydratase NIT4A
Names
3-cyanoalanine hydratase
Cyanoalanine nitrilase A
Nitrilase 4A
XP_016483754.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001325754.1 → NP_001312683.1  bifunctional nitrilase/nitrile hydratase NIT4A

    Status: PROVISIONAL

    Source sequence(s)
    D63331
    UniProtKB/Swiss-Prot
    Q42965
    Conserved Domains (1) summary
    PLN02504
    Location:5 → 347
    PLN02504; nitrilase

RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015939057.1 Reference Ntab-TN90 Primary Assembly

    Range
    69194..75416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016628268.1 → XP_016483754.1  bifunctional nitrilase/nitrile hydratase NIT4A

    UniProtKB/TrEMBL
    A0A1S4B4I4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q42965.1 GenPept UniProtKB/Swiss-Prot:Q42965

Gene LinkOut

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Molecular Biology Databases