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LOC107798617 pathogenesis-related leaf protein 6-like [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107798617, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107798617
Gene description
pathogenesis-related leaf protein 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC107798617 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015929936.1 (58699..59325, complement)

NW_015929936.1Genomic Context describing neighboring genes Neighboring gene basic form of pathogenesis-related protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015929936.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pathogenesis-related leaf protein 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015929936.1 Reference Ntab-TN90 Primary Assembly

    Range
    58699..59325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016621636.1 → XP_016477122.1  pathogenesis-related leaf protein 6-like

    UniProtKB/TrEMBL
    A0A1S4AK94
    Conserved Domains (1) summary
    cd05381
    Location:32 → 163
    SCP_PR-1_like; SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases