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LOC107793232 probable galacturonosyltransferase 15 [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107793232, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107793232
Gene description
probable galacturonosyltransferase 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC107793232 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015800675.1 (47993..54509)

NW_015800675.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107793222 Neighboring gene floral homeotic protein AGAMOUS-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015800675.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis during cell division in plants. Breyne P, et al. Proc Natl Acad Sci U S A, 2002 Nov 12. PMID 12393816, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015800675.1 Reference Ntab-TN90 Primary Assembly

    Range
    47993..54509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016615541.1 → XP_016471027.1  probable galacturonosyltransferase 15 isoform X1

    UniProtKB/TrEMBL
    A0A1S4A2W7
    Conserved Domains (2) summary
    cd06429
    Location:224 → 535
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02867
    Location:2 → 548
    PLN02867; Probable galacturonosyltransferase

  2. XM_016615550.1 → XP_016471036.1  probable galacturonosyltransferase 15 isoform X1

    UniProtKB/TrEMBL
    A0A1S4A2W7
    Conserved Domains (2) summary
    cd06429
    Location:224 → 535
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02867
    Location:2 → 548
    PLN02867; Probable galacturonosyltransferase

  3. XM_016615556.1 → XP_016471042.1  probable galacturonosyltransferase 15 isoform X2

    UniProtKB/TrEMBL
    A0A1S4A2Y2
    Conserved Domains (1) summary
    cl11394
    Location:118 → 429
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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