U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107785217 probable galacturonosyltransferase 13 [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107785217, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107785217
Gene description
probable galacturonosyltransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107785217 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015911972.1 (18673..24369)

NW_015911972.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107785219 Neighboring gene uncharacterized LOC107785218 Neighboring gene phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015911972.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable galacturonosyltransferase 13; probable galacturonosyltransferase 14

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015911972.1 Reference Ntab-TN90 Primary Assembly

    Range
    18673..24369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016606463.1 → XP_016461949.1  probable galacturonosyltransferase 13 isoform X1

    UniProtKB/TrEMBL
    A0A1S3ZC91

  2. XM_016606464.1 → XP_016461950.1  probable galacturonosyltransferase 14 isoform X2

    UniProtKB/TrEMBL
    A0A1S3ZBX6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.