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LOC107777766 glucan endo-1,3-beta-glucosidase [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107777766, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107777766
Gene description
glucan endo-1,3-beta-glucosidase
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
sp41b
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Genomic context

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See LOC107777766 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015903352.1 (46098..48131, complement)

NW_015903352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107777767 Neighboring gene fe(2+) transport protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015903352.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A major stylar matrix polypeptide (sp41) is a member of the pathogenesis-related proteins superclass. Ori N, et al. EMBO J, 1990 Nov. PMID 2120041, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucan endo-1,3-beta-glucosidase
Names
(1->3)-beta-glucan endohydrolase
(1->3)-beta-glucanase
Beta-1,3-endoglucanase
XP_016453381.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001325247.1 → NP_001312176.1  glucan endo-1,3-beta-glucosidase precursor

    Status: PROVISIONAL

    Source sequence(s)
    X54431
    UniProtKB/Swiss-Prot
    P23433
    Conserved Domains (1) summary
    pfam00332
    Location:36 → 346
    Glyco_hydro_17; Glycosyl hydrolases family 17

RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015903352.1 Reference Ntab-TN90 Primary Assembly

    Range
    46098..48131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016597895.1 → XP_016453381.1  glucan endo-1,3-beta-glucosidase

    Conserved Domains (1) summary
    pfam00332
    Location:36 → 346
    Glyco_hydro_17; Glycosyl hydrolases family 17
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P23433.1 GenPept UniProtKB/Swiss-Prot:P23433

Gene LinkOut

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