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LOC107757293 tight junction protein ZO-2-like [ Sinocyclocheilus rhinocerous ]

Gene ID: 107757293, updated on 14-Mar-2024

Summary

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Gene symbol
LOC107757293
Gene description
tight junction protein ZO-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus rhinocerous
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107757293 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015643297.1 (32029..111381)

NW_015643297.1Genomic Context describing neighboring genes Neighboring gene tight junction protein ZO-2-like Neighboring gene uncharacterized LOC107757292 Neighboring gene piercer of microtubule wall 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015643297.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320098_v1.1 Primary Assembly

Genomic

  1. NW_015643297.1 Reference SAMN03320098_v1.1 Primary Assembly

    Range
    32029..111381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016574734.1 → XP_016430220.1  tight junction protein ZO-2-like isoform X2

    UniProtKB/TrEMBL
    A0A673M7B3

  2. XM_016574735.1 → XP_016430221.1  tight junction protein ZO-2-like isoform X3

    UniProtKB/TrEMBL
    A0A673M7B3

  3. XM_016574733.1 → XP_016430219.1  tight junction protein ZO-2-like isoform X1

    UniProtKB/TrEMBL
    A0A673M7B3

  4. XM_016574737.1 → XP_016430223.1  tight junction protein ZO-2-like isoform X4

    UniProtKB/TrEMBL
    A0A673M7B3
Nucleotide Protein
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