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LOC107749822 dysferlin-like [ Sinocyclocheilus rhinocerous ]

Gene ID: 107749822, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107749822
Gene description
dysferlin-like
See related
Ensembl:ENSSRHG00000022738
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus rhinocerous
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107749822 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
59
Annotation release Status Assembly Chr Location
100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015638568.1 (312389..411953)

NW_015638568.1Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit 29-like Neighboring gene mastermind-like domain-containing protein 1 Neighboring gene uncharacterized LOC107749829 Neighboring gene cytochrome P450 26B1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015638568.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320098_v1.1 Primary Assembly

Genomic

  1. NW_015638568.1 Reference SAMN03320098_v1.1 Primary Assembly

    Range
    312389..411953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016565011.1 → XP_016420497.1  dysferlin-like

    UniProtKB/TrEMBL
    A0A673J240
    Related
    ENSSRHP00000045494.1, ENSSRHT00000046769.1
Nucleotide Protein
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