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LOC107743118 tight junction protein ZO-2-like [ Sinocyclocheilus rhinocerous ]

Gene ID: 107743118, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107743118
Gene description
tight junction protein ZO-2-like
See related
Ensembl:ENSSRHG00000006798
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus rhinocerous
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107743118 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015624563.1 (65729..96231)

NW_015624563.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107742900 Neighboring gene phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like Neighboring gene amyloid beta A4 precursor protein-binding family A member 1-like Neighboring gene MAM domain-containing protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015624563.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320098_v1.1 Primary Assembly

Genomic

  1. NW_015624563.1 Reference SAMN03320098_v1.1 Primary Assembly

    Range
    65729..96231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016556246.1 → XP_016411732.1  tight junction protein ZO-2-like

    UniProtKB/TrEMBL
    A0A673GHS1
    Related
    ENSSRHP00000011847.1, ENSSRHT00000012292.1
Nucleotide Protein
Heading Accession and Version

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