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LOC107728117 mitochondrial basic amino acids transporter-like [ Sinocyclocheilus rhinocerous ]

Gene ID: 107728117, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107728117
Gene description
mitochondrial basic amino acids transporter-like
See related
Ensembl:ENSSRHG00000045214
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus rhinocerous
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107728117 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015662583.1 (827389..838628, complement)

NW_015662583.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase PAK 6-like Neighboring gene myosin-6 pseudogene Neighboring gene solute carrier family 25 member 47a Neighboring gene iodothyronine deiodinase 3b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015662583.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320098_v1.1 Primary Assembly

Genomic

  1. NW_015662583.1 Reference SAMN03320098_v1.1 Primary Assembly

    Range
    827389..838628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016538199.1 → XP_016393685.1  mitochondrial basic amino acids transporter-like isoform X2

  2. XM_016538198.1 → XP_016393684.1  mitochondrial basic amino acids transporter-like isoform X1

    UniProtKB/TrEMBL
    A0A673MTM7, A0A673NEE5
    Related
    ENSSRHP00000091611.1, ENSSRHT00000094089.1
Nucleotide Protein
Heading Accession and Version

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