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LOC107713225 cytochrome c oxidase subunit 5A, mitochondrial-like [ Sinocyclocheilus rhinocerous ]

Gene ID: 107713225, updated on 18-Sep-2024

Summary

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Gene symbol
LOC107713225
Gene description
cytochrome c oxidase subunit 5A, mitochondrial-like
See related
Ensembl:ENSSRHG00000007330
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus rhinocerous
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
zebrafish all
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Genomic context

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See LOC107713225 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015626381.1 (580985..595144)

NW_015626381.1Genomic Context describing neighboring genes Neighboring gene CUGBP Elav-like family member 4 Neighboring gene ribonuclease P protein subunit p25-like protein Neighboring gene protein FAM219B-like Neighboring gene AT-rich interactive domain-containing protein 3B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015626381.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c oxidase subunit 5A, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320098_v1.1 Primary Assembly

Genomic

  1. NW_015626381.1 Reference SAMN03320098_v1.1 Primary Assembly

    Range
    580985..595144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016518679.1 → XP_016374165.1  cytochrome c oxidase subunit 5A, mitochondrial-like

    UniProtKB/TrEMBL
    A0A673GJH0
    Related
    ENSSRHP00000012905.1, ENSSRHT00000013373.1
Nucleotide Protein
Heading Accession and Version

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