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st3gal3b ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [ Sinocyclocheilus anshuiensis ]

Gene ID: 107700542, updated on 14-Mar-2024

Summary

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Gene symbol
st3gal3b
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b
See related
Ensembl:ENSSANG00000042127
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Annotation information
Annotation category: partial on reference assembly
Orthologs
zebrafish all
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Genomic context

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See st3gal3b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015546102.1 (565597..611924, complement)

NW_015546102.1Genomic Context describing neighboring genes Neighboring gene artemin-like Neighboring gene prostaglandin E receptor 4 (subtype EP4) c Neighboring gene lysine-specific demethylase 4A-like Neighboring gene protein tyrosine phosphatase receptor type Fb Neighboring gene uncharacterized LOC107700546

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015546102.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015546102.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    565597..611924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016502237.1 → XP_016357723.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like

    UniProtKB/TrEMBL
    A0A671RMK9
    Related
    ENSSANP00000084892.1, ENSSANT00000090231.1
Nucleotide Protein
Heading Accession and Version

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