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c1galt1la core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like a [ Sinocyclocheilus anshuiensis ]

Gene ID: 107695751, updated on 14-Mar-2024

Summary

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Gene symbol
c1galt1la
Gene description
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like a
See related
Ensembl:ENSSANG00000051910
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Also known as
c1galt1a
Orthologs
zebrafish all
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Genomic context

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See c1galt1la in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015544165.1 (1507704..1513408, complement)

NW_015544165.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 385A Neighboring gene tachykinin-3-like Neighboring gene beta-1,4-N-acetyl-galactosaminyl transferase 1a Neighboring gene uncharacterized LOC107695799 Neighboring gene solute carrier family 26 member 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015544165.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like
Names
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015544165.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    1507704..1513408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016495780.1 → XP_016351266.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like

    UniProtKB/TrEMBL
    A0A671TAM7

  2. XM_016495779.1 → XP_016351265.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like

    UniProtKB/TrEMBL
    A0A671TAM7
    Related
    ENSSANP00000106139.1, ENSSANT00000112628.1

  3. XM_016495778.1 → XP_016351264.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like

    UniProtKB/TrEMBL
    A0A671TAM7
Nucleotide Protein
Heading Accession and Version

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