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LOC107692879 kin of IRRE-like protein 1 [ Sinocyclocheilus anshuiensis ]

Gene ID: 107692879, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107692879
Gene description
kin of IRRE-like protein 1
See related
Ensembl:ENSSANG00000022592
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107692879 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015542398.1 (24015..60547, complement)

NW_015542398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107692908 Neighboring gene uncharacterized LOC107692892 Neighboring gene cell adhesion molecule 3-like Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015542398.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015542398.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    24015..60547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016492085.1 → XP_016347571.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A671NHT7
    Related
    ENSSANP00000045652.1, ENSSANT00000048568.1
Nucleotide Protein
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