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LOC107692482 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like [ Sinocyclocheilus anshuiensis ]

Gene ID: 107692482, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107692482
Gene description
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like
See related
Ensembl:ENSSANG00000001555
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107692482 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015542379.1 (1695250..1756055)

NW_015542379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107692531 Neighboring gene toll/interleukin-1 receptor domain-containing adapter protein-like Neighboring gene G protein-activated inward rectifier potassium channel 4-like Neighboring gene ATP-sensitive inward rectifier potassium channel 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015542379.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015542379.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    1695250..1756055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016491547.1 → XP_016347033.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

    UniProtKB/TrEMBL
    A0A671K606

  2. XM_016491550.1 → XP_016347036.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X2

    UniProtKB/TrEMBL
    A0A671K606, A0A671K8Q6
    Related
    ENSSANP00000002781.1, ENSSANT00000002990.1

  3. XM_016491546.1 → XP_016347032.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

    UniProtKB/TrEMBL
    A0A671K606

  4. XM_016491549.1 → XP_016347035.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

    UniProtKB/TrEMBL
    A0A671K606

  5. XM_016491548.1 → XP_016347034.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

    UniProtKB/TrEMBL
    A0A671K606
Nucleotide Protein
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