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LOC107692396 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Sinocyclocheilus anshuiensis ]

Gene ID: 107692396, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107692396
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
See related
Ensembl:ENSSANG00000049723
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107692396 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015542377.1 (2560867..2575541)

NW_015542377.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase activating polypeptide 1b (pituitary) receptor type I Neighboring gene uncharacterized LOC107692430 Neighboring gene tetraspanin-1-like Neighboring gene phosphoinositide-3-kinase, regulatory subunit 3b (gamma) Neighboring gene uncharacterized LOC107692398

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015542377.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015542377.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    2560867..2575541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016491436.1 → XP_016346922.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A671SZD2
    Related
    ENSSANP00000101533.1, ENSSANT00000107769.1
Nucleotide Protein
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