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ndst1b N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1b [ Sinocyclocheilus anshuiensis ]

Gene ID: 107689187, updated on 14-Mar-2024

Summary

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Gene symbol
ndst1b
Gene description
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1b
See related
Ensembl:ENSSANG00000041241
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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See ndst1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015540909.1 (392270..517817)

NW_015540909.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene myozenin-2-like Neighboring gene pre-mRNA-splicing factor RBM22 Neighboring gene uncharacterized LOC107689191 Neighboring gene ribosomal protein S14 Neighboring gene CD74 molecule, major histocompatibility complex, class II invariant chain b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015540909.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015540909.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    392270..517817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016487114.1 → XP_016342600.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A671RP31, A0A671RQ74
    Related
    ENSSANP00000085383.1, ENSSANT00000090749.1

  2. XM_016487115.1 → XP_016342601.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A671RP31, A0A671RQ74

  3. XM_016487116.1 → XP_016342602.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A671RP31, A0A671RQ74
    Related
    ENSSANP00000085584.1, ENSSANT00000090955.1

  4. XM_016487113.1 → XP_016342599.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A671RP31, A0A671RQ74

  5. XM_016487112.1 → XP_016342598.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like

    UniProtKB/TrEMBL
    A0A671RP31, A0A671RQ74
Nucleotide Protein
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