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chpfb chondroitin polymerizing factor b [ Sinocyclocheilus anshuiensis ]

Gene ID: 107688915, updated on 14-Mar-2024

Summary

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Gene symbol
chpfb
Gene description
chondroitin polymerizing factor b
See related
Ensembl:ENSSANG00000014247
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
zebrafish all
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Genomic context

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See chpfb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015540892.1 (2240387..2250707)

NW_015540892.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 5 activator 2-like Neighboring gene protein Wnt-6-like Neighboring gene acid-sensing ion channel 4-like Neighboring gene mannose-1-phosphate guanyltransferase alpha-B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015540892.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015540892.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    2240387..2250707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016486741.1 → XP_016342227.1  chondroitin sulfate synthase 2-like

    UniProtKB/TrEMBL
    A0A671LTW5, A0A671M7E6
    Related
    ENSSANP00000027751.1, ENSSANT00000029556.1
Nucleotide Protein
Heading Accession and Version

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