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LOC107684684 transmembrane protein 5-like [ Sinocyclocheilus anshuiensis ]

Gene ID: 107684684, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107684684
Gene description
transmembrane protein 5-like
See related
Ensembl:ENSSANG00000015597
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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See LOC107684684 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015539852.1 (504171..507531, complement)

NW_015539852.1Genomic Context describing neighboring genes Neighboring gene poly [ADP-ribose] polymerase 12-like Neighboring gene SLIT-ROBO Rho GTPase-activating protein 1-like Neighboring gene cytochrome b-c1 complex subunit Rieske, mitochondrial-like Neighboring gene uncharacterized LOC107684656

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015539852.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015539852.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    504171..507531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016481008.1 → XP_016336494.1  transmembrane protein 5-like

    UniProtKB/TrEMBL
    A0A671MB66
    Related
    ENSSANP00000030460.1, ENSSANT00000032420.1
Nucleotide Protein
Heading Accession and Version

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